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Abstract #3200

WRIST CARTILAGE SEGMENTATION USING U-NET CONVOLUTIONAL NEURAL NETWORKS ENRICHED WITH ATTENTION LAYERS

Nikita A. Vladimirov1, Ekaterina A. Brui1, Anatoliy G. Levchuk1, Aleksandr Y. Efimtsev1,2, and David Bendahan1,3
1Faculty of Physics, ITMO University, Saint-Petersburg, Russian Federation, 2Federal Almazov North-West Medical Research Center, Saint-Petersburg, Russian Federation, 3Aix-Marseille Universite, CNRS, Centre de Résonance Magnétique Biologique et Médicale, UMR, Marseille, France

Synopsis

Detection of cartilage loss is crucial for the diagnosis of osteo- and rheumatoid arthritis. An automatic tool for wrist cartilage segmentation may be of high interest as the corresponding manual procedure is tedious. U-Net is a convolution neural network, which has been largely used for biomedical images, but its performance in segmenting wrist cartilage images is modest. Here, we assessed whether adding attention layers to U-Net architecture would improve the segmentation performance. A truncated version of U-Net with attention layers showed the best performance(3D DSC - 0.811), as well as in the accuracy of cartilage cross-section measurements (bias - 6.4 mm2).

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Keywords