Meeting Banner
Abstract #4978

Quantifying the uncertainty of neural networks using Monte Carlo dropout for safer and more accurate deep learning based quantitative MRI

Mehmet Yigit Avci1,2, Ziyu Li3, Qiuyun Fan2,4,5, Susie Huang2,4, Berkin Bilgic2,4, and Qiyuan Tian2,4
1Electrical and Electronics Engineering, Bogazici University, Istanbul, Turkey, 2Athinoula A. Martinos Center for Biomedical Imaging, Charlestown, MA, United States, 3Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford, United Kingdom, 4Department of Radiology, Harvard Medical School, Boston, MA, United States, 5Department of Biomedical Engineering,College of Precision Instruments and Optoelectronics Engineering, Tianjin University, Tianjin, China

Synopsis

Neural networks reduce the data requirement for deep learning-based quantitative MRI, nonetheless their uncertainty/confidence has rarely been characterized. We implemented Monte Carlo dropout, a Bayesian approximation of Gaussian process, using U-Net that include dropout layers (active during training and inference) to address this. The uncertainty was calculated as the variance of predictions from 100 different dropout configurations. The estimates were calculated as the average of predictions. The proposed method also achieved higher accuracy in estimating FA and MD from only 3 diffusion-weighted images compared to standard U-Net, which was readily usable for other MRI applications (reconstruction, super-resolution, denoising, segmentation, classification).

How to access this content:

For one year after publication, abstracts and videos are only open to registrants of this annual meeting. Registrants should use their existing login information. Non-registrant access can be purchased via the ISMRM E-Library.

After one year, current ISMRM & ISMRT members get free access to both the abstracts and videos. Non-members and non-registrants must purchase access via the ISMRM E-Library.

After two years, the meeting proceedings (abstracts) are opened to the public and require no login information. Videos remain behind password for access by members, registrants and E-Library customers.

Click here for more information on becoming a member.

Keywords