Abstract #3058

A python-based post-processing toolkit for rodent perfusion MRI

Jinyuan Zhang^1,2, Yishuang Yang^1,2, Rong Xue^1,2, Yan Zhuo^1,2, and Zihao Zhang^1,3

¹State Key Laboratory of Brain and Cognitive Science, Institute of Biophysics, Chinese Academy of Sciences, Beijing, China, ²University of Chinese Academy of Sciences, Beijing, China, ³Institute of Artificial Intelligence, Hefei Comprehensive National Science Center, Hefei, China

Synopsis

Keywords: Software Tools, Software ToolsWe developed a python-based post-processing toolkit for rodent perfusion MRI with an easy-to-use graphical user interface (GUI). Until now, this toolkit provides interfaces for the post-processing of dynamic susceptibility contrast (DSC) MRI and flow-sensitive alternating inversion recovery (FAIR) pulsed arterial spin labeling (pASL). For each modality, the toolkit has function modules including image viewer, display of time series data, ROI tools, and visualization of quantitative parameter maps. This toolkit is open source and welcomes added features. It will benefit preclinical studies using perfusion MRI.

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