Keywords: Segmentation, Multiple SclerosisNew methods have enabled segmentation on sequences other than T1 for brain volume measurements in multiple sclerosis (MS), such as those more readily available in clinic as FLAIR and PD. However, reliability studies have not been performed yet in MS, limiting their use. Here, we assessed within-scanner and between-scanner reliability of FLAIR segmentations in 30 people with MS on three different MR scanners. We found similar reliability compared to T1w scans, with high intra-scanner reliability but systematic differences between scanners. This suggests that within-scanner volume measurements of FLAIR are possible, but standardization is needed for between-scanner single patient measurements.
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