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Abstract #0710

Enhancing Liver Cyst Segmentation for ADPKD Patients Through Deep Learning Assistance

Mina Chookhachizadeh Moghadam1, Dominick Romano1, Mohit Aspal1, Xinzi He1, Kurt Teichman1, Zhongxiu Hu1,2, Mert Rory Sabuncu1,3, and Martin Prince1,2
1Radiology, Weill Cornell Medicine, New York City, NY, United States, 2Radiology, Columbia university, New York City, NY, United States, 3School of Electrical and Computer Engineering, Cornell University, New York City, NY, United States

Synopsis

Keywords: Liver, Segmentation, ADPKD, PLD, Liver Cyst, Deep Learning, Segmentation Model

Motivation: Autosomal dominant polycystic kidney disease (ADPKD) often also has polycystic liver disease (PLD), impacting patients' well-being. Manually segmenting liver cysts for measuring disease burden is time-consuming and error-prone, necessitating an automated solution.

Goal(s): We introduce a deep-learning (DL) framework for liver cyst segmentation in ADPKD/PLD patients.

Approach: An nnUNet-based framework ensembled 2D and 3D models trained on our institute's ADPKD dataset to detect liver cysts in an external test set. Additionally, we implemented patient, cyst, and voxel-level evaluation metrics for clinical impact assessment.

Results: Our model achieved an 84% cyst-level Dice score significantly reducing annotation time by 91%.

Impact: This research aims to revolutionize PLD monitoring by transitioning from qualitative to quantitative, replicable, and scalable approaches. Advanced DL models can produce high-quality liver cysts annotations and introduce cyst-level evaluation metrics, aiding radiologists with precise disease assessment and clinical decisions.

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