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Abstract #1950

Self-Supervised Pre-Training Based Hybrid Network for Deep Gray Matter Nuclei Segmentation

Lijun Bao1 and Yang Deng2
1Department of Electronic Science, Xiamen University, Xiamen, China, 2Institute of Artificial Intelligence,Xiamen University, Xiamen, China

Synopsis

Keywords: Analysis/Processing, Segmentation

Motivation: Vision Transformers (ViTs) have the potentiality to outperform convolutional neural networks (CNNs) in the task of deep gray matter nuclei segmentation. However, Transformer-based models require large labeled datasets for training.

Goal(s): Our goal is to design a Transformer-based model and alleviate the model's dependence on labeled data.

Approach: We present a CNN-Transformer hybrid Network (CTNet) for deep gray matter nuclei segmentation. Moreover, a novel self-supervised pre-training approach that combines rotation prediction and masked feature reconstruction is proposed to pre-train the CTNet.

Results: Our method achieves better performance than other comparison models on human brain MRI datasets.

Impact: This is the first study that utilizes self-supervised learning methods for deep gray matter nuclei segmentation. Our method can achieve outstanding segmentation performance and effectively assist clinical doctors in the diagnosis and treatment of neurodegenerative diseases.

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