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Abstract #3813

Fully Automated Deep Learning 3D Segmentation of the Aorta from Contrast Enhanced Magnetic Resonance Angiography Images

David Dushfunian1, Haben Berhane1, Sara Siddiqui1, Anthony Maroun1, Bradley D. Allen1, and Michael Markl1
1Department of Radiology, Northwestern University, Chicago, IL, United States

Synopsis

Keywords: AI/ML Software, Machine Learning/Artificial Intelligence, Contrast enhanced MRA, MRA, Magnetic Resonance Angiography

Motivation: Contrast-enhanced MRA (CE-MRA) of the thoracic aorta is an essential to assess and monitor aortic complications, and to quantify aortic dimensions. However, aortic dimensions’ measurement is cumbersome. Thus, automating aortic 3D-segmentation from CE-MRA is important to improve analysis workflow efficiency.

Goal(s): We aimed to, accurately and precisely, automate thoracic aorta 3D-segmentation from CE-MRA scans using deep-learning.

Approach: Using 125 CE-MRA scans we trained and tested a convolutional neural network to automatically segment the thoracic aortic.

Results: Automated-segmentations was faster to output and had excellent agreement with manual-segmentations in metrics like aortic diameters and volume, dice scores, Hausdorff distance and average symmetrical surface distance.

Impact: To our knowledge, this is the first study that implemented a fully-automated 3D-segmentation of contrast-enhanced MRA images. Such automation could possibly facilitate the clinical workflow when combined with future applications aiming at automating dimensions’ calculation at standardized locations.

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