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Abstract #3513

In vivo structural template of human brainstem nuclei based on multi-contrast MRI at 7 Tesla

Marta Bianciardi 1 , Nicola Toschi 1,2 , Brian L. Edlow 3 , Cornelius Eichner 1 , Kawin Setsompop 1 , Jonathan R Polimeni 1 , Emery N Brown 4 , Hannah C Kinney 5 , Bruce R Rosen 1 , and Lawrence L Wald 1

1 Department of Radiology, A.A. Martinos Center for Biomedical Imaging, MGH and Harvard Medical School, Boston, MA, United States, 2 Medical Physics Section, Department of Biomedicine and Prevention, Faculty of Medicine, University of Rome Tor Vergata, Rome, Italy, 3 Department of Neurology, A. A. Martinos Center for Biomedical Imaging, MGH & Harvard Medical School, Boston, MA, United States, 4 Department of Anesthesia, Critical Care and Pain Medicine, MGH, Boston, MA, United States, 5 Department of Pathology, Boston Childrens Hospital, Harvard Medical School, Boston, MA, United States

Despite spectacular advances in neuroimaging of the human cerebral gray-matter, in-vivo visualization of human brainstem nuclei (Bn) is more challenging because of the limited sensitivity and contrast between Bn and adjacent white-matter using standard neuroimaging methods. Through combined examination of 1.1mm-isotropic multi-contrast (diffusion-fractional-anisotropy and T2-weighted) anatomical images acquired at 7 Tesla, we automatically generated in-vivo probabilistic brainstem labels of subcortical hubs of the ascending-arousal, autonomic and motor systems. These labels constitute a first step in the development of an in-vivo neuroimaging template of Bn in standard space to facilitate future clinical and research investigations of human brainstem function and pathology.

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