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Abstract #1760

Denoising intrinsic MRI repetitions using self-supervised iterative residual learning

Zihan Li1, Berkin Bilgic2,3, Ziyu Li4, Kui Ying5, David H. Salat2,3, Jonathan R. Polimeni2,3, Hongen Liao1, Susie Huang2,3, and Qiyuan Tian1
1Department of Biomedical Engineering, Tsinghua University, Beijing, China, 2Athinoula A. Martinos Center for Biomedical Imaging, Massachusetts General Hospital, Charlestown, MA, United States, 3Harvard Medical School, Boston, MA, United States, 4Wellcome Centre for Integrative Neuroimaging, FMRIB, Nuffield Department of Clinical Neurosciences, University of Oxford, Oxford, United Kingdom, 5Department of Engineering Physics, Tsinghua University, Beijing, China

Synopsis

Keywords: Analysis/Processing, Data Processing, magnetic resonance imaging, diffusion tensor imaging, self-supervised learning, transfer learning

Motivation: MRI with high resolution and/or acceleration factor suffers from intrinsic low signal-to-noise ratio. Supervised learning-based denoising significantly improves image quality, but requires high-SNR data as training targets.

Goal(s): To denoise images using noisy image repetitions without additional acquisition.

Approach: Noise2Average trains CNN to map each noisy image to its residual compared to the average of all noisy images at iteration 1 and all denoised images from iteration k-1 at iteration k. The images from opposite phase-encoding directions of EPI or different echo times of ME-MPRAGE are noisy repetitions.

Results: Noise2Average outperforms BM4D, AONLM and Noise2Noise in terms of image quality and DTI metrics.

Impact: By reducing the requirement for training data and time, Noise2Average substantially increases the feasibility and accessibility of deep learning based denoising methods for MRI and potentially benefits a wider range of clinical and neuroscientific studies.

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