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Abstract #3129

Layer-fMRI in lower brain structures: why is it so hard and what can we do about it?

Renzo Huber1, Rüdiger Stirnberg2, Chung (Kenny) Kan1, Philipp Ehses2, Kenshu Koiso3, Susan Wardle1, Isabel Gephart1, Nadine Graedel4, Sam Audrain1, Andrew Persichetti1, A Tyler Morgan1, and Peter Bandettini1
1NIH, Bethesda, MD, United States, 2German Center for Neurodegenerative Diseases (DZNE), Bonn, Germany, 3Maastricht University, Maastricht, Netherlands, 4University College London, London, United Kingdom

Synopsis

Keywords: fMRI Acquisition, fMRI, layer-fMRI, UHF, EPI, VASO, sub-millimeter fMRI, 7 tesla

Motivation: Layer-fMRI can address questions of directional information flow, but it’s difficult in lower brain areas.

Goal(s): We want to make layer-fMRI work in low brain structures, despite commonly low tSNR, EPI distortions, and EPI phase errors.

Approach: We tested the efficacy of four advanced acquisition approaches to mitigate these challenges: pTx, dual-polarity readouts, multi-shot segmentation, and aggressive GRAPPA.

Results: We found that pTx and high GRAPPA had limited impact for improved image quality. Though, multi-shot segmentation and dual-polarity readouts allowed layer-fMRI applications in low brain areas.

Impact: This work helps to fulfill the promise of layer-fMRI beyond the top 50% of the cortex.

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Keywords