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Abstract #3462

Incorporating mesoscopic orientation dependent R2 from magnetic susceptibility into the Standard Model of Diffusion in White Matter

Anders Dyhr Sandgaard1, Andrada Ianus2, Noam Shemesh2, Valerij G. Kiselev3, and Sune Nørhøj Jespersen1,4
1Center of Functionally Integrative Neuroscience, Department of Clinical Medicine, Aarhus University, Aarhus, Denmark, 2Champalimaud Research,Champalimaud Centre for the Unknown, Lisbon, Portugal, 3Division of Medical Physics, Department of Radiology, University Medical Center Freiburg, Freiburg, Germany, 4Department of Physics and Astronomy, Aarhus University, Aarhus, Denmark

Synopsis

Keywords: Microstructure, Microstructure

Motivation: $$$R_2$$$ in WM is orientation dependent due to microscopic magnetic anisotropy. So far, the Standard Model of diffusion (SM) has been extended to only include isotropic $$$R_2$$$ (TEdDI).

Goal(s): Our goal is to characterize $$$R_2$$$ anisotropy of a multi-echo dMRI signal for long diffusion times and incorporate $$$R_2$$$ anisotropy into TEdDI (STEdDI).

Approach: We simulate $$$R_2$$$ of PGSE signal in magnetized cylinders using Monte-Carlo, and fit TEdDI and STEdDI on ex vivo mouse multi-echo dMRI data acquired at 16.4T.

Results: $$$R_2$$$ anisotropy outside axons are non-axially-symmetric, depends on B0 direction, gradient direction and b-value. Residuals are significantly lower with STEdDI in dMRI data.

Impact: Interplay between microscopic magnetic fields and diffusion weighting affects $$$R_2$$$ in extra-axonal space. Incorporating $$$R_2$$$ anisotropy$$$\,$$$into modeling lowered the residuals and may allow rotation-free estimation of $$$R_2$$$ anisotropy, which could be useful to gain a deeper insight into brain microstructure.

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Keywords