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Abstract #3650

fastMRI Prostate: A Public, Biparametric MRI Dataset to Advance Machine Learning for Prostate Cancer Imaging

Radhika Tibrewala1,2,3, Tarun Dutt1, Angela Tong1,2, Luke Ginocchio1, Riccardo Lattanzi1,2,3, Mahesh B Keerthivasan1,4, Steven H Baete1,2,3, Sumit Chopra1, Yvonne W Lui1,2, Daniel K Sodickson1,2,3, Hersh Chandarana1,2, and Patricia M Johnson1,2,3
1Bernard and Irene Schwartz Center for Biomedical Imaging, Department of Radiology, New York University Grossman School of Medicine, New York, NY, United States, 2Center for Advanced Imaging Innovation and Research (CAI2R), Department of Radiology, New York University Grossman School of Medicine, New York, NY, United States, 3Vilcek Institute of Graduate Biomedical Sciences, New York University Grossman School of Medicine, New York, NY, United States, 4Siemens Medical Solutions USA, New York, NY, United States

Synopsis

Keywords: Prostate, Prostate, k-space data, public

Motivation: There is a lack of publicly available, raw k-space data for prostate MRI.

Goal(s): To compile and release raw k-space data for clinical prostate MRI and demonstrate its utility for development of deep learning methods for image reconstruction and automated diagnosis.

Approach: Biparametric MRI data from 312 patients with associated prostate cancer labels were added to the public fastMRI repository. Deep-learning models were trained on the data to reconstruct images from undersampled k-space and perform automated diagnosis of prostate cancer (PCa) on these images.

Results: SSIM > 0.866 and AUC > 0.80 (test set) for the deep-learning reconstruction and automated PCa diagnosis respectively.

Impact: Raw k-space data with clinical labels from fastMRI prostate will enable researchers to develop clinically relevant deep-learning reconstruction and automated diagnosis models which may ultimately advance the diagnosis and management of prostate cancer.

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