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Abstract #3832

In vivo application of MP-PCA denoising of quantitative T2* and magnetic susceptibility maps (QSM) in normal and pathological cerebral tissues

Liad Doniza1, Patrick Fuchs2, Anita Karsa2, Mitchel Lee2, Tamar Blumenfeld-Katzir3, Dvir Radunsky3, Karin Shmueli2, and Noam Ben-Eliezer3,4,5
1Department of Electrical Engineering, Tel Aviv University, Tel Aviv, Israel, 2University College London, London, United Kingdom, 3Department of Biomedical Engineering, Tel Aviv University, Tel Aviv, Israel, 4Sagol School of Neuroscience, Tel Aviv University, Tel Aviv, Israel, 5Center for Advanced Imaging Innovation and Research, New York University Langone Medical Center, New York, NY, United States

Synopsis

Keywords: Signal Modeling, Quantitative Susceptibility mapping

Motivation: Higher spatial resolution can increase the diagnosis quality of Quantitative Susceptibility Mapping (QSM) by improving the sensitivity to local field variations and minimizing partial volume effects, yet, at the cost of reduced signal-to-noise ratio (SNR).

Goal(s): Improve the SNR of high-resolution QSM data, while preserving structural properties of the tissue.

Approach: Use Marchenko-Pastur principal component analysis (MP-PCA) to denoise T­2*-weighted images, and generate quantitative T2* and QSM maps with higher SNR.

Results: MP-PCA denoising was able to efficiently improve the SNR on numerical phantom and in vivo. Proof of concept is provided for healthy brain anatomy and for a patient with brain metastases.

Impact: Marchenko Pastur principal component analysis can be used to enhance the SNR of T2*-weighted images, T2* maps, and QSM maps while preserving the fine details of the tissue.

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Keywords